Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPH--LQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
1UDH Chain:A ((54-242))------------------------RRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR-PDPRVHCVLKFSHPSPLSKV-PFGTCQHFLVANRYLETRSISPIDW-----


General information:
TITO was launched using:
RESULT:

Template: 1UDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81035 for 1427 contacts (-56.8/contact) +
2D Compatibility (PS) -20039 + (NN) -8158 + (LL) 2788
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -126644.0 ( -88.75 by residue)
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_1UDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UDH-query.scw
PDB file : Tito_Scwrl_1UDH.pdb: