Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLE-----DMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDV----IID-VM-F-----L----EASTEKLISRYKETRRAHPLMEQGKRS--LINAINDEREHLSQIRSIANFVID--TTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 3ZDQ Chain:A ((360-555)) | FQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPV--------WLRSKIGTVSQEPI--LFSC--SIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVG--EKGVLLSGGQKQRIAIARALLKNPKIL---------LLDEATSALDAE-NEYLVQEALDRLM-DGRTVLVIAHRL--STIKNANMVAVLD-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24133 for 1163 contacts (-20.8/contact) +
2D Compatibility (PS) -17931 + (NN) -940 + (LL) 9400
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -36904.0 ( -31.73 by residue)
QMean score : 0.195
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