Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFK---LLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQA-MSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4CNN Chain:B ((33-244))
---------------------EALAYREATFDILEWRVDHFMDIASTQ--SVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKA---TVDYAHAHNVYVVMSNHDFHQTPSAEEMVLRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVK----PGQIAVNDLRS-----
General information:
TITO was launched using:
RESULT:
Template:
4CNN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114712 for 1599 contacts (-71.7/contact) +
2D Compatibility (PS) -21842 + (NN) -10250 + (LL) 3960
1D Compatibility (HY) -14000 + (ID) 3650
Total energy: -160494.0 ( -100.37 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4CNN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CNN-query.scw
PDB file :
Tito_Scwrl_4CNN.pdb
: