Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYP-HQLSGGMRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEGQKRLETIEGIVPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI |
| 3GFO Chain:A ((4-232)) | -EDYILKVEELNYNY---SDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGIL-----KPSSGRILFDNKPID-YSRKGIMKLR-ESIGIVFQDPDNQLFSASVYQDVSFGAV--NMKLPEDEIRKRVDNALKRTGI----EHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180109 for 1816 contacts (-99.2/contact) +
2D Compatibility (PS) -24384 + (NN) -7819 + (LL) 6308
1D Compatibility (HY) -18000 + (ID) 3950
Total energy: -227954.0 ( -125.53 by residue)
QMean score : 0.588
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