Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQ--STSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWE-ESGRWGAYGPELMRLQDR----HGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFI-MKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHSTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKK--DDQRELADALYAEFNT-KFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK |
| 1NJ1 Chain:A ((40-415)) | -----------------FSEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILD-RDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP---------------------------------WDKF------------------------------------------------------------------------PGS---------E-----------YT--------V------------------------------AF------D-------TLMPD-------GKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKDI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114021 for 2939 contacts (-38.8/contact) +
2D Compatibility (PS) -38755 + (NN) -8054 + (LL) 12596
1D Compatibility (HY) -22400 + (ID) 4300
Total energy: -174934.0 ( -59.52 by residue)
QMean score : 0.508
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