Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQ-FGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDK--RRGKLTISKKWDQTTAILTGNFLLALGLE-----HLMAVKDNRVHQLISE-----SIVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHY---IGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 1RQI Chain:A ((44-259)) | --------------------------------------GGKRLRPFLVYATGHMFGVSTNTLDAP---AAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAE--GKHVPLDALERIHRHKTGALIRAAVRLGAL-SAGDKGR-RALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQ--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -9701 for 1509 contacts (-6.4/contact) +
2D Compatibility (PS) -20735 + (NN) -4964 + (LL) 8944
1D Compatibility (HY) -11600 + (ID) 3550
Total energy: -41606.0 ( -27.57 by residue)
QMean score : 0.265
|
|
|