Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEQRLLNTFLELVQIDSETGN---ESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAI--NV-----KPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSEL---L-DADFGYAIDASADV---GTTVVGAPTQMLISAKIIG--KTAHASTPKEGVSAINIAAKAISRMKLGQ-------------------------------------------------------VDEITTANIGKFHGGS----ATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNL-G--LSANTIISGGGSDGSIINTFGIPSVILGVGY--EKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
| 2POK Chain:A ((44-481)) | ----QHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDES-----YTAPFVMAHFKSSR--PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRN-GFMYGRGV----DDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-D--KVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105866 for 2892 contacts (-36.6/contact) +
2D Compatibility (PS) -38188 + (NN) -13170 + (LL) 1020
1D Compatibility (HY) -9600 + (ID) 3350
Total energy: -169154.0 ( -58.49 by residue)
QMean score : 0.489
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