Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQHSSKTAYVYSDKLLQYRFH--DQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDE-A------------KKYGLNDEENGQ-FKHMHRHSATIVGGALTLADLIMSGKVLNGCHL-GGGLHHAQPGRASGFCIYNDIAITAQYIA-KEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGK-FLFPGSGHYTERGEDIGYGHTVNVPLE----PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRD--PLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 2VQM Chain:A ((6-389)) | ---PRFTTGLVYDTLMLKHQCTCG-----HAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQ--KKLLGSLASVFVRLPCGGVGV-DSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLA----GGRIVLALEGGHDL-TAICDASEACVSALLGNELD--PLPEKVLQ--------------------QRPNANAVRSMEKVMEIHS--KYWRCLQR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205909 for 3148 contacts (-65.4/contact) +
2D Compatibility (PS) -36834 + (NN) -11673 + (LL) 2036
1D Compatibility (HY) -10800 + (ID) 4350
Total energy: -267530.0 ( -84.98 by residue)
QMean score : 0.454
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