Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
3G3Z Chain:A ((7-116))
-----------------------------------------------LGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTESAQEFSDKVFATFG---------
General information:
TITO was launched using:
RESULT:
Template:
3G3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42395 for 722 contacts (-58.7/contact) +
2D Compatibility (PS) -11689 + (NN) -1989 + (LL) 5112
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -53811.0 ( -74.53 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_3G3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3Z-query.scw
PDB file :
Tito_Scwrl_3G3Z.pdb
: