Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYE-GFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQ-SQEVEAPQNAQTQQPQASTS-NNSQVTATPT-ESKAS-EGSSVNVNAHLKQIAQRESGGNIHAVNPTSGAA-GKYQFLQSTWDSV--------APAKYKGVS-PANAPESVQDAAAVKLYNTGGAGHWVTA-------- |
| 4LL1 Chain:A ((5-296)) | IKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKY-----GSVDYWVKAFLDRPSQPTQETKKNFEVVPDLMAPVSAKKEKKVSSMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTSSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKINILRVEYSLLIYVSVPGSKKVILDLPLVIGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44904 for 1458 contacts (30.8/contact) +
2D Compatibility (PS) -22375 + (NN) 7705 + (LL) 212
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: 23146.0 ( 15.88 by residue)
QMean score : 0.079
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