Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSG---FYTIVKMVEGLMHDLNITIPVAIHLDHG-----------SSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGI-IYADPKECQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGL--STGLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKE-VYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK |
| 1GVF Chain:A ((2-285)) | SIIS---TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFK----HIALEEIYALCSAYSTTYNM--PLALHLDHHESLDDIRRKVHA-----------GVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGS----------AFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENP-QGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82492 for 2148 contacts (-38.4/contact) +
2D Compatibility (PS) -28399 + (NN) -14008 + (LL) 2292
1D Compatibility (HY) -21600 + (ID) 5400
Total energy: -149607.0 ( -69.65 by residue)
QMean score : 0.634
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