Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFK-PFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQA---FDD----SGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIE-------AAQYFDGKGEIPREDVATVLKEIVTSN--HFNHQEFQIISGE-QDIKDALTQFEIEKD |
| 3GPI Chain:A ((4-230)) | SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTR-PDT-LASIVHLRPEILVYCVAASEYS------LSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80690 for 1602 contacts (-50.4/contact) +
2D Compatibility (PS) -20983 + (NN) -1232 + (LL) 528
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -112877.0 ( -70.46 by residue)
QMean score : 0.430
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