Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4V1C Chain:B ((16-226)) | -------------ACQRVVVMVGAGISTPSGIPDFRSP---------YDLPYPEAIFELPFFFHNPKPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90544 for 1476 contacts (-61.3/contact) +
2D Compatibility (PS) -20772 + (NN) -7217 + (LL) 3356
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -135277.0 ( -91.65 by residue)
QMean score : 0.362
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