Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLA---INSLEELRNMIGIKSDYFYKCLYVN-----------------------------------------DHFYNVI-KIPKRKKDEYRELMIPNMA--LKNIQRWIL-DNVLYRRQVHKCATGFVPRKSIVNNAIPHVGQKYILKMDIENFFPS---------ITFKQVRKIF--SEMGYKFELATALANLCTV----------NNQL-----PQGAPTSPYIANIIFYNID-----KRIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVN-QYNFRINESK---------------TIMFKPGDRKK--VTGIIVNEKI---SVPK-------------TLIREVR-----KQIYFVNKFGLE-EHLIRNNYS----LDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLG--NIESSNMYRD---NIDFDDIELHWIN--------------------------------- |
| 2I3O Chain:D ((2-516)) | FRSRPNALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSALCVTQNNLCGLGGDLFALIRDENGQIDLNGSGQASRAVSIDYYESGLTKIPERGP--YAAITVPGIAGSWDEIFRKFATDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWSSIFPNGSVPVAGEILKQPDLAESFRLSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDLDEFRIYETSPNSQGITVIEWIRGESHGYDSRTWEAKIEDIFETEEAYDKRRKITDPSYNIAQHDSANGKGLPKRDHNDIGDTTYFSISDSEGRSVSIIQSNYGFGSGIVPKGTGFVLQNRGSYFTLQRDHPNALPGKRTFHTLAACVEKEHDLYASLGSGGDIQPQVQQILEILKDNTDPQAILDKPRWTEPYTIYEAPGAVYVESEELYRNVSKQISGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRGDGIAIPYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86091 for 2206 contacts (-39.0/contact) +
2D Compatibility (PS) -33364 + (NN) 11775 + (LL) 28
1D Compatibility (HY) -5200 + (ID) 3400
Total energy: -116252.0 ( -52.70 by residue)
QMean score : 0.223
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