Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLL-DRSLTLKDISFYRYHKASAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSYQL-DYKIAINLRGNNTA--FYSVSLPYIELFNKRSNNPIVIFQQSLKELMSFALK
3QXC Chain:A ((23-240))
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQD-NRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTR---SNNPIVIFQQSLKVLMSFALK
General information:
TITO was launched using:
RESULT:
Template:
3QXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162605 for 1741 contacts (-93.4/contact) +
2D Compatibility (PS) -22800 + (NN) -8622 + (LL) 4
1D Compatibility (HY) -26000 + (ID) 9200
Total energy: -229223.0 ( -131.66 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3QXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXC-query.scw
PDB file :
Tito_Scwrl_3QXC.pdb
: