Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMS--------YSELVEHV--FELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQI--VY------HIWGFLELYKKGAINSKEKITLAIPSGNF--GNALGAFYAKKMG--LNIAKIKVVTNSNDVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTHEKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 4NLE Chain:A ((18-485)) | --TIPNVLANRYASDEMVAIWSPEAKIIAERRL-WLAVLRAQAELGVAVPDGVVEDYERVLENVDLESIAARERVRHDVKARIEEFNAHEHVHKGMTSRDLTENVEQLQIRQSLELVF-SHGVAVVARLAERAVVYRD---LVMAGRSHNVAAQATT---------LGKRFASAAEETLVALTRLRELIDRYPLRGVKGPMGTAQDMLDLFGGD-----VGKLADLERRVAEFLGFTEVFTSVGQVYPRSLDHDVLSALVQFGAGPSSMAHTIRLMAGHELVTEGFAPGQVGSSAMPHKMNTRSCERVNGLQVVLRGYASMAA-ELAGAQWNEG-DVFCSVVRRVALPDAFFAIDG--QTETFLTVLDEFGAYPAVIQRELDRYLPFLATTRILMAAVRAGVGREAAHEVIKEHAVAVALAMREQGREPDLIDRLAGDPRLP-LDKVALEAALED----------KQAFTGAAGDQVDGVVAAVGELVSRYPEAAKYTSG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NLE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36449 for 3465 contacts (-10.5/contact) +
2D Compatibility (PS) -46782 + (NN) -20135 + (LL) 2748
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -114768.0 ( -33.12 by residue)
QMean score : 0.256
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