Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKKSV------IVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCN--GNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKAPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAI----GGTSW---GPTNYYFKDLAEEYRGSFHPS---------NFQVLVNGGIRLGTKHQGFEIGLKIQ-TIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF |
| 4LRZ Chain:E ((13-306)) | SPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTY----------------CAEGIIGTCALSLAAISGQAVKTMA----DQHFKQVLWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFILLLHPV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61762 for 1892 contacts (-32.6/contact) +
2D Compatibility (PS) -26234 + (NN) -1562 + (LL) 928
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -95330.0 ( -50.39 by residue)
QMean score : 0.130
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