Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MSKELILK-R-IKEARAKHAIQGANPIYRNIIKVEF-EDLVE-EYKHFQVL-NKAELIESAKENLEQAILKALE-NFQSKKVLHSTDLNLNFEAFKDF-----TL-QPYDKEIEAMREELFEIDTALL--------HGVCGISSLGMIGAVS---SHASPRL------------------------LSLITLNCIILLKK-E-SIVRNLSEGVQALKN---------QGQNGALPT-NMLLIGGPSRTADIE-LKTVFGVHGPQKVAVI-LY------------------ |
| 1W9Y Chain:A ((2-305)) | ENFPIISLDKVNGVERAATMEMIKDACENW---GFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14784 for 1222 contacts (-12.1/contact) +
2D Compatibility (PS) -22295 + (NN) -7590 + (LL) 644
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -54775.0 ( -44.82 by residue)
QMean score : 0.288
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