Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKE-GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSF----KLLNEGFESLRLPIIKAGLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE----- |
1U5T Chain:A ((20-232)) | ------VNKTILEKQSVELRDQLMVFQERLVEFAKKHNSELQASPEFRSKFMHMCSSI----GIDPLSLFDRDKHLFTVNDFYYEVCLKVIEICRQTKDMNGGVISFQELEKVHFRKLNVG-----------------------LDDLEKSIDMLK----SLECFEIFQIRGKKFLRSVPNELTSDQTKILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGLLWIDYQGGAEALYWDPSWITRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15631 for 1416 contacts (11.0/contact) +
2D Compatibility (PS) -21180 + (NN) -7985 + (LL) 2812
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -19772.0 ( -13.96 by residue)
QMean score : 0.234
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