Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKKSPIHVS--SSNYIIEADFELFAIALKNMIDNAIKYSDD-KQVFLDFIG----N--NLVVSNKSKPLK-EDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNG-RICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
3SL2 Chain:A ((3-153)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQIVRFMSLIIDRFEMTKEQ--EFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPEGGHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD----LGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91480 for 935 contacts (-97.8/contact) +
2D Compatibility (PS) -14792 + (NN) -9185 + (LL) 24532
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -98225.0 ( -105.05 by residue)
QMean score : 0.432
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