Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIET-FPEPMKMIVDAGHEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFSMTIHPDVSARPQVLLMHEKIIEHINQHEGVRWVTFNEIADDFLKRNPRKK |
2C71 Chain:A ((19-193)) | -----------------------------------------LTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNV---DLVFVG-----------------------GLTANDWIPS-------T-----------------------------TAEQRAAAVI---NGV-R---DGT-IILLHDVQPEPHPTPEALDIIIPTLKS-RGYEFVTLTELFTLKGVPIDPSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61547 for 1329 contacts (-46.3/contact) +
2D Compatibility (PS) -18711 + (NN) -8471 + (LL) 6384
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -89745.0 ( -67.53 by residue)
QMean score : 0.561
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