Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLYSLVKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGFDKNASMLRALIAFGFGYLEAGTLTNIAQSGNEKPRLFRHIEEESLQNAMGFNNYGA--------ILGVRAFNRFAPYKTPIGINLGKNKHIEQAHALEDYQAVLNQCLNIGDYYTFNLSSPNTPNLRD--------------------LQNKVFVNELFCMAKEMTHKPL-FLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTT--IDKSLVFAPKEMGGLSGKCLTKKSREIFKELAKAFFNKSV-LVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR |
| 3O8A Chain:A ((91-409)) | --------------------------------------------------------LDFINPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNK--DTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKK-GGVSGAKLKDISTKFICEMYN-YTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90828 for 2407 contacts (-37.7/contact) +
2D Compatibility (PS) -31155 + (NN) -15282 + (LL) 5220
1D Compatibility (HY) -23200 + (ID) 5450
Total energy: -160695.0 ( -66.76 by residue)
QMean score : 0.424
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