Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPE------------HISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGG----KKYAISNGFDPMFKF-----EHPQKSLFDTTPFK-----IAMVGRYSNEKNQSVLIKAVALSRYK-QDIVLLLKGKGPDE-----KKIKLLAQKLGVKTEFGFV------NSHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 2X6Q Chain:A ((2-414)) | KMYEVKKRKLEDYKSIIGEEEVSKIQEKAEKLKGRSFVHVNSTSFGG---GVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGR-AVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFI------ITKHMERYLDILNSLG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136865 for 2906 contacts (-47.1/contact) +
2D Compatibility (PS) -39945 + (NN) -16101 + (LL) 1380
1D Compatibility (HY) -13200 + (ID) 2300
Total energy: -207031.0 ( -71.24 by residue)
QMean score : 0.345
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