Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYF-TKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD--RRIGIDIEPKRD-------------GFIQCDFLNYKLPVHQKVICLGNPPFGHRGVMALEFINHARNCDFVCFILPMFF-ES-------QGKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 3GRU Chain:A ((30-205)) | ----------------------------QCFLIDKNFVNKAVESANLT-------KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLIKRG--FDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFY----PKPKVYSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFYRFLQNR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107718 for 1141 contacts (-94.4/contact) +
2D Compatibility (PS) -16311 + (NN) -7225 + (LL) 4792
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -136562.0 ( -119.69 by residue)
QMean score : 0.436
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