Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLENVKKSLFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKEN--SGCFNLGVLYYQGHGVEKNLKKAASFYSKACDL-----NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD--LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDG--DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD--SPGCFNAGNMYHHGEGAAK---NFKEALARYSKACELEN-G---------GGCFNLGAMQYNGEGATRNEKQAIENFKKGCKLGAKGACDILKQLKIKV |
| 3U4T Chain:A ((230-480)) | ------------------------------VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYE----LAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMK----KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN----KGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN----KEYVKADSSFVKVLELKPNIYIGYLWRARANAA----QDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT----INRDKVKADAAWKNILALDPTNKKAIDGLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9482 for 1568 contacts (-6.0/contact) +
2D Compatibility (PS) -22097 + (NN) -2749 + (LL) 1996
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -33432.0 ( -21.32 by residue)
QMean score : 0.287
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