Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQ-DKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNLKEVALD------AFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKSSAETR |
| 4G7A Chain:B ((25-247)) | ---------------------EWSYEG-EKGPEHWAQLKPEFFWCKL-KNQSPINIDKKYKVKANLPKLNLYYKTAKESEVVNNGHTIQINIKEDNTLNYLGEKYQLKQFHFHTPSEHTIEKKSYPLEIHFVHKTEDGKILVVGVMAKLGKTNKELDKILNVAPAEEG--EKILDKNLNLNNLIPKDKRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMVN-PNNRPVQEINSRWIIEGF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92631 for 1673 contacts (-55.4/contact) +
2D Compatibility (PS) -23088 + (NN) -6111 + (LL) 2512
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -142118.0 ( -84.95 by residue)
QMean score : 0.422
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