Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPE------YSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVLSIMERNP-DSNENPYNTAIIIDPQGKIILKYRKLFPWNPIEP--------------WYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYS----------TQVNDQWILTNRSNAWHNLMYTVSVNLAGYD-NVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
1FO6 Chain:A ((3-304)) | -----------RQMILAVGQQGP--IARAETREQVVGRLLDMLTNAAS--RGVNFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKE-YEAYRPFQHLEKRYFEPGDLGFPVYDVDAA-KMGMFICNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKVGMEEG-CMLLGHSCIVAPTGEIVALTTTLEDEVITAALDLDRCRELREHIFNFKAHRQPQHYGLIAEF---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169634 for 2249 contacts (-75.4/contact) +
2D Compatibility (PS) -30155 + (NN) -22460 + (LL) 1396
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -233203.0 ( -103.69 by residue)
QMean score : 0.442
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