Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQD-EYENLFCIVNSHAITLPI-EPIFLKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGVIAFDETREGVFNLLNIYMLLSD--ESPEKIEERFR--NKGYGDFKKELAEVVIQSLKPIQERYQEISDDE--VKAVLNCGAEKARPLARATYQKAKELMGLI |
| 2G36 Chain:A ((13-339)) | ---MRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI-----DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSR-VPKLPGT-DG-RKMSKSYG---NIINLEISEKELEQTILRMMTDPARVRRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152782 for 2442 contacts (-62.6/contact) +
2D Compatibility (PS) -33088 + (NN) -9723 + (LL) 456
1D Compatibility (HY) -23200 + (ID) 5350
Total energy: -223687.0 ( -91.60 by residue)
QMean score : 0.484
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