Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNL-EKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKI----------------QPMVLINSIKI---------FNSKPLEAYKARTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA--- |
| 1DQW Chain:A ((1-267)) | MHKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFA--DIGNTVKLQYSAGVYRIAEWAD--ITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRD--AKVEGERYRKAGWEAYLRRCGQQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105316 for 1860 contacts (-56.6/contact) +
2D Compatibility (PS) -25297 + (NN) -14372 + (LL) -80
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -149165.0 ( -80.20 by residue)
QMean score : 0.379
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