Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFTRIPLKVFIKKYNPQEPKKETIENFEKEINSLLENVPRQDDEEFQKNEINKFLKNAYGYDCNTYEKVDSVIYVDKEVRVLIEVKALNNKTEFPKNRENPLSKAFCQMVLYFLEEIEKEKNNSLKHTIICNAHEFFLFDCKDLLSLKEDKRIKKFYKNYAKKEGTDSSKPKFYKDLEQFLQEDFQGELRYTHFNLSDDFKELPLIYQVLSQEVLLKQKRTLDANTLNKDFYEELLYILGLEEQNDKGKILIKPSRTKNSLSGALKEKYKNLDDEEVMALLIAWNNRILFLRLLESLLISFEHFEKERSFLTTGNFKDFNALNTLFFEVLAKKNSERLPEIKENKILGKIPYLNSSLFDKTPLELKGHEIKLLDNKKLEIYKNSVLKKHENYQKDKASLPLLEYFFKFLHLYKFTTTPKDIKDNTDTSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESITTIVLDKFNQKYNIECDKLKELKNYLKNSYKEDKRKEYLQLLLTLRICDPAVGSGHFLVSALNEMVLIAYELGLIASLHRYSLTLENDEIIIHYTPTGEIFNYKKPLRENDPHHHIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFEEGKNTNALETLPNIDINIKCANSLISRFNLNDDLKKIPNIKKKIQEYKDLVAQYKDPNPLYPLNKADLINKIQDLKNTFSLTLKDPKTKAELEKTIEKHIKKYNFFALDDKSLLDGLNYFIPSLFGTLKLSPKEEEEAFASYGRIRALRKKLDDALSGGEYQNAFEWRFEFPEVLDDEGDFLGFDCIIGNPPYIRQEQIKDL--------KPLLEKQYQDFYNSTADIYTYFFALSFHLLREKGFSAFITSNKYARAKYGAKLREWLLKKTTLVSYMELNALKVFESAAVDTSIIHFIKQPPLKESDFKYYEPTPDDKDDLKSTPYLSMKQNALSTESFIFANATLLDLRDKIESVGTPLKDWDIQINYGIKTGANEAFIIPTEKRDEILNACKTQEERERTERLIKPILRGKDIKRYSYEWAGEWLINTHNGYTSNLKSKIPPIDIEKYPATKAHLDAHYDTIATRCDQGDTPYHLRNCAYLEDFEKEKIVYPET-SQGAYFIYENSGIFLEKTVFMIVS---DAYNLKLLTALLNSKLITFYFKNFCGGCILGKSGYQYNKHALEKIPIPQITEKNQELADKITDCAEQILALKAKDPKANTQKLEKEIDALVYQLYHLTDEEIKTIEDGQ |
| 2IH2 Chain:A ((98-412)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFS-TWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKT-SVYYLG--EVFPQKKVSAVVIRFQKSGKGL--SLWDTQESESGFTP---ILWAEY----PHWEGEIIRFET--EETRKLEISGMPLGDL-FHIRFAARSPEFKKH---P----AV---------RKEPGPGLVPVLTGRNLKPGWVDYEKNHSGL--------------------------WMPK------ER-----------AKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWR-EEFHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRD-----FVPHLTLRMLERLPVRREYGFHT------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119072 for 2361 contacts (-50.4/contact) +
2D Compatibility (PS) -31725 + (NN) -1901 + (LL) 65220
1D Compatibility (HY) -15200 + (ID) 2800
Total energy: -105478.0 ( -44.68 by residue)
QMean score : 0.259
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