Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGS-YVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGN--PKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEID--ASKKFAKMQETLDFIAERLKGVKKKKGVELFH--KANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPT-M-DIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 1N2Z Chain:A ((1-244)) | -----------------------------------------------AAPRVITLSPANTELAFAAGI--TPVGVSSYSDYPPQ---------AQKIEQVST--WQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADK-PKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDS-RVPWPQVSREQVLARSPQAIVITGGPDQ-IPKI--KQYWGEQ---LKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107936 for 1857 contacts (-58.1/contact) +
2D Compatibility (PS) -25563 + (NN) -10401 + (LL) 8476
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -144074.0 ( -77.58 by residue)
QMean score : 0.510
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