Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MRKLIQFL---FIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSK--VAWVAVIFILPVLGTISYLVF-GRNPATRK-FSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRI-AHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIHI-QYYI-FKTDAIST-EIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYME---NQAGAADGFISESGSKQYFSPVDMGDEWAQVI----YGGPYDKEK-------WVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAM-SGVDVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSFVH-AKAML----VDGTRAAIGTANFDV-RSFRLNHELMVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPL-LTRIKEVLSSLL-SPIL- |
| 4OO3 Chain:A ((3-441)) | EGFTGAPGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAPT-------GFDVDEHLKRIQGFNTRAENPTAWNEIVYTGD-----DYLEKMLAEKKGNVMIQAGNNGKKTEYIKKTLEAGINV------LSDKPMAI-----------------NSQSFKLLEECFAIAKQK-NIMLYDIMTERNEITTMLQRELSTIPAVYGEQLK------GSPE-----------------------EPAIVKESVHHLFKLV--------------------DNKPLTRPVWYLDVNQQGEGIVDV-TTHLVDLVQWEAFPDQIIDYRKDIELIDANRWTTSIS-PEEFKQVTGTDAYPDFLKKDVENDTLKVYCNGDIVYKIKGVTAKVSVIWNYTFPKGGGD---THFSVMKGSKADLVIRQGKEQN-----YQPELFVEAVKGVDLAAYEKDLTASMEKVSAEYPGVALNKVGDGVWQVEIPAKYRVGHEAH-FGQVTEHFLDYLKEGKLPDWE------------VPNMLAKYYTTTSALDMAKAKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105328 for 3120 contacts (-33.8/contact) +
2D Compatibility (PS) -42011 + (NN) -9702 + (LL) 7492
1D Compatibility (HY) -7200 + (ID) 3950
Total energy: -160699.0 ( -51.51 by residue)
QMean score : 0.177
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