Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEP-AISVPFTQAVVTTNVET-SIKTKFSSAFFSGDLD-DMPDFLAGIKALVVDVLNEI----GNGECVSIHVVSGVPI---GRGLGSSAAVATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERD--RKL------EIMH---------------FPKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHLEGDADTVKIGAAMNKAQSYLETLT--VSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 3GON Chain:A ((2-327)) | -IAVKTCGKLYWAGEYAILEPGQLALIKDIPIYM-RAEIAFSDSY-RIYSDMFDFAVDLRPNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTLECDFLVGWTKEVAVSSHMVQQIKQNINQ------NFLTSSKETVVSLVEALE-QGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQA-VAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELLYQE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164724 for 2514 contacts (-65.5/contact) +
2D Compatibility (PS) -31222 + (NN) -9666 + (LL) 884
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -220628.0 ( -87.76 by residue)
QMean score : 0.504
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