Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGR-WMINALIGQHALFGMESLLETKTAPELTEYRVRAL-ENGT-VLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTR-ILVEIIEL-LHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLDQVDSFQTGNGLLTR
4RFA Chain:A ((10-225))
EKLDTVLGYLKEFPDYYKY-VTKKTYTLNEKIIFEDE---KAKSIFFIVEGYAAVELEDNLRKTNYISIFVLPYNVLGIDAFSSYP-------KHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAK--TPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKKSPYRIDKDSLD---------------
General information:
TITO was launched using:
RESULT:
Template:
4RFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111797 for 1391 contacts (-80.4/contact) +
2D Compatibility (PS) -21718 + (NN) -6712 + (LL) 1664
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -149063.0 ( -107.16 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_4RFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RFA-query.scw
PDB file :
Tito_Scwrl_4RFA.pdb
: