Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDER---------KCEPDHCQFARGYYDRLNEALFDMLQSEEA------------ITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEG--PGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDA------KNNKRLLNAINVMNKDMIALNKKL----------KDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMR-ENSMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS--- |
| 2VSF Chain:A ((5-597)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGVALESPTGSGKTIMALKSALQYSSERKL-KVLYLVRTNSQEEQVIKELRSLS-STMKIRAIPMQGRVNMCILYRMVDDLHEINAESLAKFCNMKKREVMAGNEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADIVIAPYAYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAYGDPELSQKIHVSDLIEMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMNKRSEREIRSLLNYLYLFGEYVENEKEKVGKVPFSYCSSVASRIIAFSDQDEEKYAAILSPE-DGGYMQAACLDPSGILEVLKE--SKTIHMSGTLDPFDFYSDITGF--EIPFKKIGEIFPPENRYIAYYDGVSSKYDTLDEKELDRMATVIEDIILKVKKNTIVYFPSYSLMDRVENRVSFE-----HMKEYRGIDQKELYSMLKKFRRDHG---TIFAVSGGRLSEGNELE-----MIILAGLPFPRPDAINRSLFDYYERKYGKGWEYSVVYPTAIKIRQEIGRLIRSAEDTGACVILDKRA--GQFRKFIPD-------MKKTSDPASDIYNFFISAQAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276571 for 4424 contacts (-62.5/contact) +
2D Compatibility (PS) -57675 + (NN) -13486 + (LL) 19020
1D Compatibility (HY) -22800 + (ID) 5550
Total energy: -357062.0 ( -80.71 by residue)
QMean score : 0.395
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