Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQ------NIQNAVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAIT----QTTDGFKVDLGNL--------------TDSVKISYYTTSTDN-GASPNYTNKGQLTGDNFIKQEIEV--ATP----TSGGGGGGEGTTGSVELTKTDDSS--QKNPLEGAEFKLVNGAGATV---------------------QTGLKTNADGKLAISNLKY---------------DTYQLIETKAPQGYVLDASPVKFTIDDTHQSLFVSKENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGNTLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
| 3UXF Chain:A ((196-471)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSGRDITYTITTSIPKVDYPGGARIKRYEVVDRLDKRIKKEALTPVVKIVGQ---NE-VTLAETTDYTLITAEGKDHNWATIQLTEEGRRKASEARYNGNGETKLQVTLNAKFDAAVNLEGDLSNTAGLIPNDSPNFTWDPNNPGTTTDIPGIPTTPVLSKYGKVILTKTGTDDLADKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCLVETKAPEGYNLQADPLPFRVLAEK------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19009 for 1361 contacts (14.0/contact) +
2D Compatibility (PS) -21861 + (NN) -5836 + (LL) 19616
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: 3878.0 ( 2.85 by residue)
QMean score : 0.305
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