Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMT-SY---HQFTKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLPGANAALTALIASGLAPQP------FYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKETLKAIIKI-TGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 1S4D Chain:A ((7-252)) | -----AGLPALEKGSVWLVGAGPGDPGLLTLHAANALRQADVIVHD-ALVNEDCLKLARPGAVLEFAGKRGPSPKQRDISLRLVELARAGNRVLRLK-GGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD------RINWQGIASGSPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVRLR------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119435 for 1915 contacts (-62.4/contact) +
2D Compatibility (PS) -24645 + (NN) -13615 + (LL) 5924
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -160121.0 ( -83.61 by residue)
QMean score : 0.462
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