Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKIPVVVSLALCFSLVSPSLYASADTITAVQITKEATTDTTEPTTIDQPSRMDNSQTAPQKMTASSSEEAATTNSTEEENTPKNNLKSTSENSKTYAELFPDVNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSLTGIEHLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITGNFSLVKTLPELHTLEVLGNAITELDIENQPNLVTLSADELELKKLTLKNLSQLNGLGRIASSISIDWGDLESVTLMNLPEIISVDISGNYLDSDDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRLESSKLVDVPKLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSDQSIAWASGELSGLSKVSYTFDEVINSPAIAGKYTGTVNQPIEVKAVPVIVADKSVSYAPVNAKDEATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDLKADPVTVVVHINDIQKPQVAVNSND-ISFEVGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSEVDSSKLGTYEATIIAKSKSGASSDPIKLSVKIVDTEKPIIQINNPEIIIEKGSELTEGQIIDQVGITATDNYDQDLNIHMDLSKVDTSKP-GSYEVTIYTEDSSGNRSETVTITVKVPEARIGKITIQYMDSENNELAESNTITGEVGETYETLAKEIEGYTLKENPANSSGVFEETRQTIQYIYVKDIINPEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVKKQSKAYSKINQMPMNLPETGDSTNLLFIFMGVLLLAGLTLSKAKRKNQ |
1M9S Chain:A ((3-596)) | ----------------------------------------------------------------------------------------ETITVSTPIKQIFPDDAFAETIKDNL-KKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIK-DLSSLKDLKKLKSLSLEHNGISDI------------------------------------------------NGLVHLPQLESLYLGNNKI-TDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFT--NEVSFIFYQPVTIGKAKARFHGRVTQPLETTE-----KTVNLTRYVKYIRGNAGIYKLPREDNSLKQGTLASHRCK-----------ALTVDREARNGGKLWYRLKNIGWTKAENLSLDRYDKMEYDKGVTAYARVRNASGNSVWTKPYNTA-------GAKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTFYKQSME-KPTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEG---QLWYRIRTSSTFIGWTKAANLRAQ--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103887 for 3961 contacts (-26.2/contact) +
2D Compatibility (PS) -54818 + (NN) -6300 + (LL) 17668
1D Compatibility (HY) -25200 + (ID) 5150
Total energy: -177687.0 ( -44.86 by residue)
QMean score : 0.330
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