Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADGKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAEKGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMFQDAPFKWDV-QVEAGNT-QK----ATHFFANGIGVSKDSDKKEAAFKFASFMSAN-EEAAKIRIDNNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEKVLNG--DSTPEKALKNSEDNINKTMGFK |
| 1ELJ Chain:A ((4-380)) | ----------------------------EEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKP--NLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLEPIDEYVTED--L-LNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSE----PP---KTFDEMKAIMEKYYDPANEKYGIAWPINAYFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPY-MAPTGD---YNTQQSIFLEGRAPMMVNGPWSINDVKKAGINFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEES-IKTLALELGYIPVLTKVLDDPEIKNDP---VIYGFGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADIEGILKKYQQEILNNMQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ELJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58526 for 3201 contacts (-18.3/contact) +
2D Compatibility (PS) -39320 + (NN) -13491 + (LL) 2000
1D Compatibility (HY) -17200 + (ID) 3550
Total energy: -130087.0 ( -40.64 by residue)
QMean score : 0.466
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