Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGKPVIHEFIVVEG---------RDDTTAINRSVIADTIETNGSALSQE-TIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFIN----RQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE |
| 2ZJT Chain:A ((486-691)) | -FTDPRKSELYVVEGDMFQAILPLRGKDRVLKNTEVQAIITALGTGIHDEFDIGKLRY----HKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETT-----MDPSVRVLRQVTLDDAAAADELFSILM---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2685 for 1138 contacts (2.4/contact) +
2D Compatibility (PS) -18062 + (NN) -482 + (LL) 1996
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -21513.0 ( -18.90 by residue)
QMean score : 0.253
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