Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIFAVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKLARSEYYLSKDGEIIFNIPEENSKQKE |
1GK6 Chain:A ((355-409)) | -------------------------------------------------------------MKQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLEGEES------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8835 for 221 contacts (40.0/contact) +
2D Compatibility (PS) -6092 + (NN) -4688 + (LL) 6996
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 3351.0 ( 15.16 by residue)
QMean score : 0.505
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