Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAYVIALAIDGKMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLKR-----SNERISFGRLTLPH-QLMRLVLVEQVYRAFRIVRGEPYHK
3QUV Chain:A ((81-172))
---------------------------------------------------------------------ETLLVVPTPAGYPFTQ-ETAWQWST-----EDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRL-----------
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41940 for 468 contacts (-89.6/contact) +
2D Compatibility (PS) -8238 + (NN) -6580 + (LL) 7288
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -54170.0 ( -115.75 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: