Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYLVTGATGGLGGYALNYLKELVPMS------DIYALVRSKEK---G--ADL-KAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAP-------------GNRQVEHENVINAAKKAGVSYIAYTSFAGAD-K-------------STSALAEDHFFTEKVIEK----SGIAHTFLRNNWYFENEM-------PMIGGALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAGAGFPEILELSGPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPL-TNRVDALRELLK |
1R6D Chain:A ((1-308)) | MRLLVTGGAGFIGSHFVRQLLAGA--YPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR----KVA------DRKG-------------HDLRYSLDGGKIERELGYRPQVSFADGLARTV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93516 for 2087 contacts (-44.8/contact) +
2D Compatibility (PS) -27942 + (NN) -15284 + (LL) 1784
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -145758.0 ( -69.84 by residue)
QMean score : 0.495
|
|
|