Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDYFDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVNKQKKWLEAVSEVLESRGESEKLG
2DX5 Chain:A ((10-130))
LLEINETLVIQQRGVRVYDGEEKFDAGTLLLSTHRLIWRDQKNNECCMAIPLSQIVFIEEQAKIVVHLH--------SKNSYIRLSFKEHGQIEFYRRLSEEMTQRR------
General information:
TITO was launched using:
RESULT:
Template:
2DX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10288 for 645 contacts (-16.0/contact) +
2D Compatibility (PS) -9908 + (NN) 958 + (LL) 1180
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -23308.0 ( -36.14 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2DX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DX5-query.scw
PDB file :
Tito_Scwrl_2DX5.pdb
: