Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
3S2W Chain:A ((23-158))
--FIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYREDGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDE---RSYRVFLTEKGKKLEPDMKKIASEWGEILFSSFDDRQRREITNSLEIMFENGLKI------------
General information:
TITO was launched using:
RESULT:
Template:
3S2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43623 for 842 contacts (-51.8/contact) +
2D Compatibility (PS) -14222 + (NN) -1944 + (LL) 896
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -68693.0 ( -81.58 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3S2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S2W-query.scw
PDB file :
Tito_Scwrl_3S2W.pdb
: