Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKESGIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPV--KGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLN-KDERTGPDPDNFNF |
3WBY Chain:B ((14-282)) | ---QTVISFHDGHTMPQIGLGVWETPP-DETAEVVKEAVKLGYRSVATARLYKNEEGVGKGLED----HPEIFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYVETWKALVELKKSGRVKSIGVSNFESEHLERIMDATGVVPVVNQIELHPDFQQRALREFHEKHNIRTESWRPLGKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRMGADPNTAKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126250 for 2258 contacts (-55.9/contact) +
2D Compatibility (PS) -29064 + (NN) -12652 + (LL) 168
1D Compatibility (HY) -23600 + (ID) 6100
Total energy: -197498.0 ( -87.47 by residue)
QMean score : 0.579
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