Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITETDEVVQNTNIKL-FDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
2LOL Chain:A ((8-79))
---EQKVIEMVAEKLNKDKAIITTDSRFIEDLK-ADSLDTVELMMAIEVEYGIDIPDDEATK--IKTVSDVIKYIKER-
General information:
TITO was launched using:
RESULT:
Template:
2LOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31176 for 447 contacts (-69.7/contact) +
2D Compatibility (PS) -7541 + (NN) -2392 + (LL) 752
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -45257.0 ( -101.25 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2LOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LOL-query.scw
PDB file :
Tito_Scwrl_2LOL.pdb
: