Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELT-TKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKLLEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
3EHG Chain:A ((1-125)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSFSKGHGLLGMRERLEFANGSLHIDTENG--TKLTMAIPN--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69837 for 940 contacts (-74.3/contact) +
2D Compatibility (PS) -13931 + (NN) -4728 + (LL) 20288
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -73008.0 ( -77.67 by residue)
QMean score : 0.536
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