Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSERQFEEANIEEALTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATGEFEIGTKVVMIPNTPTE---DDPVIAENYR--RSSLFRSSG---YDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQKANANQ---SVFGVWGDGNLGFITCLLLKTIYPE----SKVIIFGKTQYKLDFFS------FVDEAHLVDEIPE-GLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENP-----IEFNSRMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV- |
| 2B5W Chain:A ((1-357)) | MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGED-HLVLGHEAVGVVVDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQAEL-GFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATG---FPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKL--PKWFLEDLVTGVHPLSEFEAAFDDDDTTI-----KTAIEFSTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127661 for 2757 contacts (-46.3/contact) +
2D Compatibility (PS) -35289 + (NN) -4844 + (LL) 132
1D Compatibility (HY) -4400 + (ID) 3300
Total energy: -175362.0 ( -63.61 by residue)
QMean score : 0.350
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