Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MELKHVIPNMEKTFGQLEFAGEGKVEQRRINGKPTILSRSYNLYSNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITAEGYKIGTRGFTNYVMYADDIVKV
4L0R Chain:A ((33-106))
GINEELSEVLQTLQDEFGQMSFDHQQLAKLIQ-------ESPTVELKDKLECELEALVGRMEAKANQITKVRKYQAQLEKQ--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4L0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 308 for 369 contacts (0.8/contact) +
2D Compatibility (PS) -7696 + (NN) -2732 + (LL) 1964
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -10256.0 ( -27.79 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_4L0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L0R-query.scw
PDB file :
Tito_Scwrl_4L0R.pdb
: